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Print tables in different output formats

Source: R/display.R, R/format.R, R/print_html.R, and 1 more
display.parameters_model.Rd

Prints tables (i.e. data frame) in different output formats. print_md() is a alias for display(format = "markdown").

Usage

# S3 method for parameters_model
display(
  object,
  format = "markdown",
  pretty_names = TRUE,
  split_components = TRUE,
  select = NULL,
  caption = NULL,
  subtitle = NULL,
  footer = NULL,
  align = NULL,
  digits = 2,
  ci_digits = 2,
  p_digits = 3,
  footer_digits = 3,
  ci_brackets = c("(", ")"),
  show_sigma = FALSE,
  show_formula = FALSE,
  zap_small = FALSE,
  verbose = TRUE,
  ...
)

# S3 method for parameters_sem
display(
  object,
  format = "markdown",
  digits = 2,
  ci_digits = 2,
  p_digits = 3,
  ci_brackets = c("(", ")"),
  ...
)

# S3 method for parameters_efa_summary
display(object, format = "markdown", digits = 3, ...)

# S3 method for parameters_efa
display(
  object,
  format = "markdown",
  digits = 2,
  sort = FALSE,
  threshold = NULL,
  labels = NULL,
  ...
)

# S3 method for equivalence_test_lm
display(object, format = "markdown", digits = 2, ...)

# S3 method for parameters_model
format(
  x,
  pretty_names = TRUE,
  split_components = TRUE,
  select = NULL,
  digits = 2,
  ci_digits = 2,
  p_digits = 3,
  ci_width = NULL,
  ci_brackets = NULL,
  zap_small = FALSE,
  format = NULL,
  groups = NULL,
  ...
)

# S3 method for parameters_model
print_html(
  x,
  pretty_names = TRUE,
  split_components = TRUE,
  select = NULL,
  caption = NULL,
  subtitle = NULL,
  footer = NULL,
  align = NULL,
  digits = 2,
  ci_digits = 2,
  p_digits = 3,
  footer_digits = 3,
  ci_brackets = c("(", ")"),
  show_sigma = FALSE,
  show_formula = FALSE,
  zap_small = FALSE,
  groups = NULL,
  verbose = TRUE,
  ...
)

# S3 method for parameters_model
print_md(
  x,
  pretty_names = TRUE,
  split_components = TRUE,
  select = NULL,
  caption = NULL,
  subtitle = NULL,
  footer = NULL,
  align = NULL,
  digits = 2,
  ci_digits = 2,
  p_digits = 3,
  footer_digits = 3,
  ci_brackets = c("(", ")"),
  show_sigma = FALSE,
  show_formula = FALSE,
  zap_small = FALSE,
  groups = NULL,
  verbose = TRUE,
  ...
)

Arguments

object

An object returned by model_parameters(), simulate_parameters(), equivalence_test() or principal_components().

format

String, indicating the output format. Can be "markdown" or "html".

pretty_names

Return "pretty" (i.e. more human readable) parameter names.

split_components

Logical, if TRUE (default), For models with multiple components (zero-inflation, smooth terms, ...), each component is printed in a separate table. If FALSE, model parameters are printed in a single table and a Component column is added to the output.

select

Character vector (or numeric index) of column names that should be printed. If NULL (default), all columns are printed. The shortcut select = "minimal" prints coefficient, confidence intervals and p-values, while select = "short" prints coefficient, standard errors and p-values.

caption

Table caption as string. If NULL, no table caption is printed.

subtitle

Table title (same as caption) and subtitle, as strings. If NULL, no title or subtitle is printed, unless it is stored as attributes (table_title, or its alias table_caption, and table_subtitle). If x is a list of data frames, caption may be a list of table captions, one for each table.

footer

Table footer, as string. For markdown-formatted tables, table footers, due to the limitation in markdown rendering, are actually just a new text line under the table. If x is a list of data frames, footer may be a list of table captions, one for each table.

align

Only applies to HTML tables. May be one of "left", "right" or "center".

digits, ci_digits, p_digits

Number of digits for rounding or significant figures. May also be "signif" to return significant figures or "scientific" to return scientific notation. Control the number of digits by adding the value as suffix, e.g. digits = "scientific4" to have scientific notation with 4 decimal places, or digits = "signif5" for 5 significant figures (see also signif()).

footer_digits

Number of decimal places for values in the footer summary.

ci_brackets

Logical, if TRUE (default), CI-values are encompassed in square brackets (else in parentheses).

show_sigma

Logical, if TRUE, adds information about the residual standard deviation.

show_formula

Logical, if TRUE, adds the model formula to the output.

zap_small

Logical, if TRUE, small values are rounded after digits decimal places. If FALSE, values with more decimal places than digits are printed in scientific notation.

verbose

Toggle messages and warnings.

...

Arguments passed to or from other methods.

sort

Sort the loadings.

threshold

A value between 0 and 1 indicates which (absolute) values from the loadings should be removed. An integer higher than 1 indicates the n strongest loadings to retain. Can also be "max", in which case it will only display the maximum loading per variable (the most simple structure).

labels

A character vector containing labels to be added to the loadings data. Usually, the question related to the item.

x

An object returned by model_parameters().

ci_width

Minimum width of the returned string for confidence intervals. If not NULL and width is larger than the string's length, leading whitespaces are added to the string. If width="auto", width will be set to the length of the longest string.

groups

Named list, can be used to group parameters in the printed output. List elements may either be character vectors that match the name of those parameters that belong to one group, or list elements can be row numbers of those parameter rows that should belong to one group. The names of the list elements will be used as group names, which will be inserted as "header row". A possible use case might be to emphasize focal predictors and control variables, see 'Examples'. Parameters will be re-ordered according to the order used in groups, while all non-matching parameters will be added to the end.

Value

If format = "markdown", the return value will be a character vector in markdown-table format. If format = "html", an object of class gt_tbl.

Details

display() is useful when the table-output from functions, which is usually printed as formatted text-table to console, should be formatted for pretty table-rendering in markdown documents, or if knitted from rmarkdown to PDF or Word files. See vignette for examples.

Examples

model <- lm(mpg ~ wt + cyl, data = mtcars)
mp <- model_parameters(model)
display(mp)
#> 
#> 
#> |Parameter   | Coefficient |   SE |         95% CI | t(29) |      p |
#> |:-----------|:-----------:|:----:|:--------------:|:-----:|:------:|
#> |(Intercept) |       39.69 | 1.71 | (36.18, 43.19) | 23.14 | < .001 |
#> |wt          |       -3.19 | 0.76 | (-4.74, -1.64) | -4.22 | < .001 |
#> |cyl         |       -1.51 | 0.41 | (-2.36, -0.66) | -3.64 | 0.001  |